Information for 9-CAAAGAAARCATGCAA (Motif 15)

A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T C T A G G A T C G T C A A C G T A C T G A G C T A C G T A G C T A G C T G T A C A G C T A C G T A C G T C T A G
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.810
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.7 +/- 29.4bp
Average Position of motif in Background52.6 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CAAAGAAARCATGCAA
TGCCAAAATAAACANN---
 A C G T A C G T A C G T A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAAAGAAARCATGCAA
CAAAGTAAACANNNN-
 A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAAAGAAARCATGCAA
-AAAGTAAACA-----
 A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAAAGAAARCATGCAA
-AAAGTAAACA-----
 A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGAAARCATGCAA
NCTAAGTAAACA-----
 A C G T A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAAAGAAARCATGCAA
--ATGTAAACADGS--
 A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
A C G T A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAAAGAAARCATGCAA
--AAACAAACATTC--
 A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAAAGAAARCATGCAA
-WAAGTAAAYA-----
 A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGAAARCATGCAA
NCWRWGTAAACANSV--
 A C G T A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAAAGAAARCATGCAA
-TAAGTAAACAAA---
 A G T C C G T A C G T A C T G A A C T G C T G A C T G A C G T A C T G A A G T C C G T A A C G T C T A G A G T C C G T A C G T A
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T A C G T