Information for 16-GGAAATTGAT (Motif 41)

A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.218e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.3 +/- 25.7bp
Average Position of motif in Background44.1 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:GGAAATTGAT----
----ATTGATTYND
 A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GGAAATTGAT--
--TAATTGATTA
 A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTGAT
NNTGGAAANN---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTGAT
AATGGAAAAT---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATTGAT
NACAGGAAAT----
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGAAATTGAT--
GWAAYHTGABMC
 A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGAAATTGAT--
--NTATYGATCH
 A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATTGAT------
NNNNNATTGATGNGTGN
 A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAAATTGAT--
GWAAYHTGAKMC
 A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGAAATTGAT----
NNANTGATTGATNTTN
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C