Information for 19-GHTGTGAGCTGCCAGC (Motif 37)

A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C
Reverse Opposite:
A C T G G T A C A G C T A C T G A C T G A G T C C G T A A T C G G T A C A C G T A T G C G T C A A G T C G T C A C A T G A T G C
p-value:1e-7
log p-value:-1.665e+01
Information Content per bp:1.777
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 31.4bp
Average Position of motif in Background55.9 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TGIF2/MA0797.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GHTGTGAGCTGCCAGC
--TGACAGCTGTCA--
 A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C
A C G T A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GHTGTGAGCTGCCAGC
--TGACAGCTGTCA--
 A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C
A C G T A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GHTGTGAGCTGCCAGC
--TGACAGGTGTCA--
 A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C
A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GHTGTGAGCTGCCAGC
--TGACAGGTGTCA--
 A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C
A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GHTGTGAGCTGCCAGC
---GACAGCTGCAG--
 A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GHTGTGAGCTGCCAGC-
-------VBTGWCAGCB
 A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GHTGTGAGCTGCCAGC
------AGGTGTCA--
 A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GHTGTGAGCTGCCAGC
-NNVVCAGCTGBN---
 A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C
A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GHTGTGAGCTGCCAGC
---AACAGCTGCAG--
 A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GHTGTGAGCTGCCAGC
NGNGACAGCTGCN---
 A T C G G A T C A C G T A C T G A C G T A T C G C G T A A C T G A T G C A C G T A C T G G T A C G T A C C T G A A C T G A G T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T