Information for 22-CYYCTTYTGGCCM (Motif 32)

A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G T C C G T A C T G A C G T A C G T A C T A G T C A G C T G A C T A G
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.782
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif31.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.2 +/- 26.4bp
Average Position of motif in Background41.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CYYCTTYTGGCCM
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.66
Offset:6
Orientation:forward strand
Alignment:CYYCTTYTGGCCM
------TTGGCA-
 A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CYYCTTYTGGCCM-
-----NTTGGCANN
 A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------CYYCTTYTGGCCM
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CYYCTTYTGGCCM
--CCGATTGGCT-
 A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CYYCTTYTGGCCM-
CCCCCTTGGGCCCC
 A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CYYCTTYTGGCCM--
---TGATTGGCTANN
 A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CYYCTTYTGGCCM---
-WCATTTTGKCCTCYT
 A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A A C G T A C G T A C G T
A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:-9
Orientation:forward strand
Alignment:---------CYYCTTYTGGCCM
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CYYCTTYTGGCCM
--GTTAATGGCC-
 A G T C G A C T A G T C A G T C A C G T C G A T G A C T A C G T A C T G A C T G A G T C A G T C G T C A
A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T