Information for 15-TATTGGGCCATTA (Motif 24)

A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G T A A C G T A C T G A C T G A T G C A G T C A G T C C G T A C G T A A C G T C G T A
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 35.7bp
Average Position of motif in Background51.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TATTGGGCCATTA--
-----GGCCATTAAC
 A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

BARX1/MA0875.1/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TATTGGGCCATTA-
------GCAATTAG
 A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TATTGGGCCATTA-
------BCMATTAG
 A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TATTGGGCCATTA--
-------YCATTAMC
 A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

BSX/MA0876.1/Jaspar

Match Rank:5
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TATTGGGCCATTA-
------CCAATTAA
 A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TATTGGGCCATTA
TTATTAGTACATAN
 A C G T A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TATTGGGCCATTA-
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

Barhl1/MA0877.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TATTGGGCCATTA--
-----NNCAATTANN
 A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

HOXB3/MA0903.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TATTGGGCCATTA--
-----ACTAATTAGC
 A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C

PH0073.1_Hoxc9/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TATTGGGCCATTA-----
--GGAGGTCATTAATTAT
 A C G T G T C A A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T