Information for 8-TGGCAAGTTT (Motif 15)

C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T
Reverse Opposite:
G T C A T G C A T C G A T A G C A C G T A G C T C A T G T A G C G A T C G C T A
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.679
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif7.85%
Number of Background Sequences with motif1387.0
Percentage of Background Sequences with motif3.02%
Average Position of motif in Targets48.5 +/- 27.5bp
Average Position of motif in Background52.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGGCAAGTTT
TTGCCAAG---
 A C G T C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGGCAAGTTT
AAGGCAAGTGT
 A C G T C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGGCAAGTTT
GGTGCCAAGT--
 A C G T A C G T C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TGGCAAGTTT
---CAAGCTT
 C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAGTTT---
CCTTGCAATTTTTNN
 A C G T A C G T C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAGTTT
NTTGGCANN---
 A C G T A C G T C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGCAAGTTT
TTGGCA-----
 A C G T C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAGTTT
AATGGAAAAT--
 A C G T A C G T C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGCAAGTTT
TGTCANYT--
 C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAGTTT
NATGGAAAAN--
 A C G T A C G T C G A T C T A G A T C G G T A C T C G A T G C A A T C G A G C T A C G T C A G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T