Information for 6-TCTGCTGCCA (Motif 8)

A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C C T G A A T C G A G T C C G T A C A T G C G T A
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.868
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif124.9
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets52.9 +/- 26.9bp
Average Position of motif in Background44.3 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TCTGCTGCCA--
---CGTGCCAAG
 A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:TCTGCTGCCA-
-----TGCCAA
 A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TCTGCTGCCA--
----TTGCCAAG
 A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TCTGCTGCCA---
---GGTGCCAAGT
 A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TCTGCTGCCA---
----ATGCCAACC
 A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCTGCTGCCA--
--VGCTGWCAVB
 A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCTGCCA-----
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCTGCTGCCA-
---GCTGTCAA
 A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCTGCTGCCA
CCAACTGCCA
 A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCTGCTGCCA
--ARNTGACA
 A C G T G T A C C G A T A C T G A T G C A G C T A C T G A G T C A G T C C G T A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A