Information for 4-GGAAAAACHCAGD (Motif 3)

A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A
Reverse Opposite:
G A C T A G T C A C G T A C T G C G T A A C T G A C G T A C G T A G C T C G A T A G C T A G T C A G T C
p-value:1e-15
log p-value:-3.643e+01
Information Content per bp:1.848
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 32.6bp
Average Position of motif in Background38.1 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGAAAAACHCAGD
GGAAATCCCC---
 A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGAAAAACHCAGD-
---AAATCACAGCA
 A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGAAAAACHCAGD-
TGACANARRCCAGRC
 A C G T A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAAACHCAGD
TGGAAAA-------
 A C G T A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGAAAAACHCAGD-
---AAACCACAGAN
 A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGAAAAACHCAGD
--NAAACCACAG-
 A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGAAAAACHCAGD
---AAACCACAGC
 A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAACHCAGD
AATGGAAAAT------
 A C G T A C G T A C G T A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGAAAAACHCAGD
---AAACCACANN
 A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGAAAAACHCAGD
CAAAAGTAAACAAAG-
 A C G T A C G T A C G T A C T G C T A G T C G A C G T A C T G A C G T A C G T A G T A C G A C T A G T C C G T A A C T G C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T