Information for 4-GAACAGCGCC (Motif 2)

T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C A C T G A G T C A C G T A C T G A G C T A C G T A T G C
p-value:1e-22
log p-value:-5.192e+01
Information Content per bp:1.841
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.24%
Number of Background Sequences with motif204.9
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets57.3 +/- 26.3bp
Average Position of motif in Background57.2 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GAACAGCGCC
--AGCGCGCC
 T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAACAGCGCC------
AGCTCGGCGCCAAAAGC
 A C G T T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAACAGCGCC
-CACAGN---
 T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAGCGCC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAGCGCC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAACAGCGCC------
CCTTCGGCGCCAAAAGG
 A C G T T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAGCGCC--
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAACAGCGCC
CCAGGAACAG----
 A C G T A C G T A C G T A C G T T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAACAGCGCC
TGGAACAGMA--
 A C G T A C G T T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAACAGCGCC---
AGCAACAGCCGCACC
 A C G T A C G T T A C G G T C A C T G A A G T C T G C A A C T G T G A C C T A G A T G C A G T C A C G T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C