Information for 8-AAWTTCTCAAATT (Motif 4)

G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T
Reverse Opposite:
G T C A C G T A C G A T A G C T C G A T A C T G C T G A C T A G G T C A T C G A G C T A G A C T C A G T
p-value:1e-13
log p-value:-2.994e+01
Information Content per bp:1.672
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif353.3
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets51.6 +/- 28.2bp
Average Position of motif in Background50.4 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAWTTCTCAAATT
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A C G T G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAWTTCTCAAATT
-NTTTCTNAGAAA
 G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T
A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AAWTTCTCAAATT--
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T A C G T A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

PB0162.1_Sfpi1_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAWTTCTCAAATT--
-GGTTCCNNAATTTG
 G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T A C G T A C G T
A C G T C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAWTTCTCAAATT
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C G T G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAWTTCTCAAATT
AAAWWTGCTGACWWD
 A C G T A C G T G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

HOXA5/MA0158.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AAWTTCTCAAATT
-----CACTAATT
 G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAWTTCTCAAATT
GAANGTTCTAGAA--
 A C G T A C G T G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAWTTCTCAAATT
---TTMACACCTT
 G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T
A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAWTTCTCAAATT
-HTTTCCCASG--
 G T C A C T G A C G A T A C G T A C G T A G T C A G C T T G A C C G T A T C G A G C T A C G A T C A G T
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T