Information for 6-CAATGCTGCCACC (Motif 3)

T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C
Reverse Opposite:
C T A G A C T G C A G T C A T G C A T G A G T C C G T A A C T G G A T C G C T A A G C T A G C T A C T G
p-value:1e-25
log p-value:-5.772e+01
Information Content per bp:1.697
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.95%
Number of Background Sequences with motif160.2
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets53.7 +/- 25.5bp
Average Position of motif in Background46.9 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAATGCTGCCACC
---VGCTGWCAVB
 T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAATGCTGCCACC-
-----ATGCCAACC
 T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAATGCTGCCACC--
----GCTGTTACCCT
 T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAATGCTGCCACC-----
--ACTATGCCAACCTACC
 T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAATGCTGCCACC-----
-ATAAATGACACCTATCA
 T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAATGCTGCCACC
---TGCTGACTCA
 T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CAATGCTGCCACC-
------TGACACCT
 T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAATGCTGCCACC-
--TGTCTGDCACCT
 T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAATGCTGCCACC-
-CTGTCTGTCACCT
 T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CAATGCTGCCACC-
-----CTGCCCGCA
 T G A C C T G A T C G A C G A T C T A G A G T C G A C T A C T G G A T C G T A C G T C A T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A