Information for 10-CATTAAATTA (Motif 14)

A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A C G T C G A T C G T A C G T A A C G T A C T G
p-value:1e-7
log p-value:-1.787e+01
Information Content per bp:1.972
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets52.6 +/- 30.2bp
Average Position of motif in Background39.6 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROP1/MA0715.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CATTAAATTA
TAATTAAATTA
 A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

PH0056.1_Hoxa9/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----CATTAAATTA--
ACGGCCATAAAATTAAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CATTAAATTA
TAATTAAATTA
 A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CATTAAATTA
-ATTAAA---
 A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CATTAAATTA
TAATTAAATTA
 A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

DUX4/MA0468.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CATTAAATTA
TGATTAAATTA
 A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CATTAAATTA-
TAATYNRATTAR
 A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C G T
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

PH0095.1_Lhx5/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CATTAAATTA-----
ANNATTTAATTAATTNN
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

DUXA/MA0884.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CATTAAATTA-
NTGATTAAATTAN
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C G T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

ALX3/MA0634.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CATTAAATTA--
--TCTAATTAAA
 A G T C C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A