Information for 7-GCANTAAACM (Motif 11)

A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A
Reverse Opposite:
A C G T A T C G A C G T A C G T G C A T C G T A C G A T A C G T A T C G A T G C
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.694
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif397.6
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets55.1 +/- 26.7bp
Average Position of motif in Background50.1 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd9/MA0913.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCANTAAACM
GCAATAAAAA
 A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

HOXA10/MA0899.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCANTAAACM
GGTAATAAAAA
 A C G T A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

PH0063.1_Hoxb8/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCANTAAACM--
ACCGGCAATTAATAAA
 A C G T A C G T A C G T A C G T A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCANTAAACM---
--AATAAACAATN
 A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A A C G T A C G T A C G T
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCANTAAACM
GCACTTAA--
 A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCANTAAACM
CCAATAAAAA
 A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCANTAAACM
GCAATAAAA-
 A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCANTAAACM
-AAATAAACA
 A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCANTAAACM
TCCAATCCACA
 A C G T A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCANTAAACM--
-AAGTAAACAAA
 A T C G A T G C C G T A G C T A G C A T C G T A G T C A C G T A A T G C G T C A A C G T A C G T
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A