Information for 9-GAAAAMGCTGGMACMT (Motif 9)

A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T
Reverse Opposite:
G T C A C A G T A C T G A C G T A C G T A G T C A T G C C G T A A C T G G A T C C A T G A C G T A C G T C G A T C G A T G T A C
p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.735
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.4 +/- 18.0bp
Average Position of motif in Background57.5 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSF4/MA0771.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAAAAMGCTGGMACMT
GAANNTTCTAGAA---
 A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAAAMGCTGGMACMT
-NAACAGCTGG-----
 A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T
A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAAAAMGCTGGMACMT
-AAAATGCTGACT---
 A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T
A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAAAAMGCTGGMACMT
GAACGTTCTAGAA---
 A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GAAAAMGCTGGMACMT
------CCAGGAACAG
 A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAAAAMGCTGGMACMT
-----GGTTGGCAT--
 A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAAAAMGCTGGMACMT
GAANGTTCTAGAA---
 A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAMGCTGGMACMT
TAGAANVTTCTAGAA---
 A C G T A C G T A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAAAAMGCTGGMACMT
-----NGCTN------
 A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TP63/MA0525.2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAAAMGCTGGMACMT---
-AACATGTTGGGACATGTC
 A C T G G C T A C G T A T G C A T G C A G T A C C A T G A G T C C G A T A T C G C T A G G T C A C G T A G T A C G T C A A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A G T C C T G A G C A T A C T G G A C T G A C T T C A G A C T G C T A G C T G A A G T C C G T A G A C T A C T G G A C T G T A C