Information for 9-GAAGCTTCCA (Motif 6)

C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A
Reverse Opposite:
A C G T A C T G T A C G T G C A C G T A A C T G A G T C C A G T G A C T G T A C
p-value:1e-10
log p-value:-2.439e+01
Information Content per bp:1.740
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif6.41%
Number of Background Sequences with motif998.7
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets59.4 +/- 27.2bp
Average Position of motif in Background52.3 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GAAGCTTCCA
---GCTTCC-
 C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAAGCTTCCA
-AAGCTTG--
 C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCTTCCA-----
NNNCAGCTGTCAATATN
 A C G T A C G T C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAAGCTTCCA
--NGCTN---
 C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGCTTCCA-----
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T A C G T C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAAGCTTCCA----
AACTAGCTGTCAATAC
 A C G T A C G T C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAAGCTTCCA--
--ATTTTCCATT
 C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAAGCTTCCA--
--ATTTTCCATT
 C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A A C G T A C G T
A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAAGCTTCCA----
AACGAGCTGTCAATAC
 A C G T A C G T C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAAGCTTCCA
---GCTCCG-
 C A T G C T G A G T C A C T A G A G T C G C A T A C G T A T G C A G T C C G T A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T