Information for 7-AACAGACTAGAAT (Motif 6)

C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T
Reverse Opposite:
C T G A A C G T A C G T A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T A C G T
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 17.7bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSF2/MA0770.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AACAGACTAGAAT
GAANGTTCTAGAA-
 A C G T C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T

HSF1/MA0486.2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AACAGACTAGAAT
GAACGTTCTAGAA-
 A C G T C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A A C G T

HSF4/MA0771.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AACAGACTAGAAT
GAANNTTCTAGAA-
 A C G T C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AACAGACTAGAAT
-BCAGACWA----
 C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AACAGACTAGAAT
TAGAANVTTCTAGAA-
 A C G T A C G T A C G T C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T

Gata1/MA0035.3/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AACAGACTAGAAT
-ANAGATAAGAA-
 C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AACAGACTAGAAT-----
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AACAGACTAGAAT--
-NCAGATAAGAANNN
 C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T A C G T A C G T
A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AACAGACTAGAAT---
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T A C G T A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AACAGACTAGAAT-----
-NNGATCTAGAACCTNNN
 C G T A C G T A G T A C C G T A A C T G G T C A A G T C A C G T C G T A A C T G C G T A C G T A G A C T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G