Information for 13-CAAGAATTCTGGG (Motif 16)

A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G
Reverse Opposite:
G T A C A G T C A G T C C G T A A T C G C G T A C G T A A G C T A C G T A G T C C G A T C G A T C T A G
p-value:1e-6
log p-value:-1.533e+01
Information Content per bp:1.842
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 23.9bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CAAGAATTCTGGG----
--RGSMTBCTGGGAAAT
 A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAAGAATTCTGGG--
CAATGCATTGTGGGTA
 A C G T A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAAGAATTCTGGG---
GGAAAAATTGTTAGGAA
 A C G T A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAAGAATTCTGGG-
--TGATTTATGGCC
 A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxa9/MA0594.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAAGAATTCTGGG
--TGATTTATGGC
 A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAAGAATTCTGGG---
----NNHTGTGGTTWN
 A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAAGAATTCTGGG---
--AAAATTGTTATGAA
 A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAAGAATTCTGGG-
--TGATTTATGGCC
 A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G A C G T
A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Hoxc9/MA0485.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAGAATTCTGGG-
-NTGATTTATGGCC
 A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G A C G T
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

ELF1/MA0473.2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAAGAATTCTGGG--
---NACTTCCGGGTT
 A G T C C G T A C G T A A C T G C G T A C T G A A C G T A C G T A T G C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T