Information for 9-TTAATTAAAATKA (Motif 18)

C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
Reverse Opposite:
G A C T G T A C G C T A A G C T C G A T A G C T C G A T G T C A G T C A C A G T C A G T C G T A G C T A
p-value:1e-8
log p-value:-2.047e+01
Information Content per bp:1.642
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.5 +/- 22.5bp
Average Position of motif in Background47.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----TTAATTAAAATKA
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T A C G T C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PH0101.1_Lmx1b/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TTAATTAAAATKA
NNAATTAATTAAAAANN
 A C G T A C G T A C G T A C G T C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

PH0100.1_Lmx1a/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----TTAATTAAAATKA
CGAATTAATTAAAAACC
 A C G T A C G T A C G T A C G T C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PH0095.1_Lhx5/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTAATTAAAATKA
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0091.1_Lhx1/Jaspar

Match Rank:5
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTAATTAAAATKA
CGAATTAATTAATAATG
 A C G T A C G T A C G T A C G T C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

PH0011.1_Alx1_2/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATTAAAATKA
NNNAATTAATTAANGNG-
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G A C G T

PH0093.1_Lhx3/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TTAATTAAAATKA
GAAATTAATTAAATAAT
 A C G T A C G T A C G T A C G T C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T

PH0153.1_Prop1/Jaspar

Match Rank:8
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TTAATTAAAATKA
CGAATTAATTAAGAAAC
 A C G T A C G T A C G T A C G T C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

PH0069.1_Hoxc4/Jaspar

Match Rank:9
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATTAAAATKA
NNTNNTTAATTAATNCG-
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTAATTAAAATKA
NTAATTAATAT--
 C G A T A C G T G T C A G T C A C A G T A C G T C G T A C T G A C G T A T C G A C G A T C A T G C T G A
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T