Information for 1-GTAAAAKTTAKACTAA (Motif 1)

C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A
Reverse Opposite:
A C G T A G C T C G T A C T A G A C G T G T A C A G C T G C T A G T C A G T C A A C G T A C G T A C G T A C G T G T C A G T A C
p-value:1e-15
log p-value:-3.472e+01
Information Content per bp:1.808
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.7 +/- 25.9bp
Average Position of motif in Background45.1 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GTAAAAKTTAKACTAA
AATGCAATAAAATTTAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTAAAAKTTAKACTAA--
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTAAAAKTTAKACTAA
NCYAATAAAA----------
 A C G T A C G T A C G T A C G T C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GTAAAAKTTAKACTAA
CTACCAATAAAATTCT------
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTAAAAKTTAKACTAA
CTAATATTGCTAAA--
 C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTAAAAKTTAKACTAA
CTAATATTGCTAAA--
 C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GTAAAAKTTAKACTAA
TAGGTAATAAAATTCA------
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GTAAAAKTTAKACTAA
ACGGCCATAAAATTAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GTAAAAKTTAKACTAA
AAAGCTCGTAAAATTT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTAAAAKTTAKACTAA
-CAAAATCGAAACTAA
 C A T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G A T C T G A A C T G C G T A A G T C G C A T C T G A C G T A
A C G T T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A