Information for 3-GAGGGAGGTC (Motif 9)

A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C
Reverse Opposite:
A T C G C G T A T G A C A G T C A C G T A G T C A G T C A G T C C G A T A G T C
p-value:1e-7
log p-value:-1.669e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif6.58%
Number of Background Sequences with motif63.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets30.6 +/- 12.4bp
Average Position of motif in Background46.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAGGTC-
CGTGGGTGGTCC
 A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAGGTC
GGGCGGGAAGG-
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAGGGAGGTC--
--GGGAGGACNG
 A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C A C G T A C G T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGAGGTC----
NTNTGGGGGGTCNNNA
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C A C G T A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGAGGTC
CTTCGCGGGGGGTC
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAGGTC
GGCGGGAARN-
 A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGGAGGTC-
GCTTCGTGGGGGGTCT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

GLIS3/MA0737.1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGAGGTC
CTTCGTGGGGGGTC
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAGGGAGGTC
NGCGTGGGCGGR-
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAGGTC-
TGGGGAAGGGCM
 A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A T G C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A