Information for 1-TCGAGGCCCC (Motif 4)

A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C
Reverse Opposite:
A C T G C T A G T C A G A C T G A G T C A G T C A C G T A G T C A T C G C T G A
p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.778
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif155.3
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets51.4 +/- 26.8bp
Average Position of motif in Background49.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TCGAGGCCCC
-CTAGGCCT-
 A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCGAGGCCCC
-CNAGGCCT-
 A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCGAGGCCCC
NTCAAGGTCA-
 A C G T A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCGAGGCCCC------
--CAGGCCNNGGCCNN
 A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCGAGGCCCC-
-CAAGGHCANV
 A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCGAGGCCCC
BTCAAGGTCA-
 A C G T A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCGAGGCCCC-
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCGAGGCCCC---
---AAGACCCYYN
 A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCGAGGCCCC-----
NNNGGGGCGCCCCCNN
 A C G T A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCGAGGCCCC
TCAAGGTCAN
 A G C T A T G C C T A G C G T A A C T G A C T G G T A C A G T C A G T C G T A C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C