Information for 15-CTATTGTTTG (Motif 27)

G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G
Reverse Opposite:
A T G C G C T A G T C A C G T A A T G C G T C A T C G A C G A T G T C A A C T G
p-value:1e-6
log p-value:-1.423e+01
Information Content per bp:1.734
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif174.6
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets45.4 +/- 23.7bp
Average Position of motif in Background52.2 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CTATTGTTTG
CCATTGTTC-
 G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CTATTGTTTG
CCATTGTTYB
 G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CTATTGTTTG
--ATTGTTA-
 G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CTATTGTTTG
NCCATTGTTY-
 A C G T G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CTATTGTTTG--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CTATTGTTTG----
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.75
Offset:-7
Orientation:reverse strand
Alignment:-------CTATTGTTTG-----
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CTATTGTTTG
--ATTGTT--
 G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----CTATTGTTTG---
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CTATTGTTTG----
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T G T A C C A G T G C T A A G C T A C G T A T C G A C G T C A G T C G A T A T C G A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A