Information for 10-YTCYYAGTGTYCW (Motif 10)

A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T
Reverse Opposite:
C G T A A C T G C T G A C G T A A G T C C G T A A G T C A C G T C T A G C T A G A C T G C G T A C T G A
p-value:1e-11
log p-value:-2.761e+01
Information Content per bp:1.857
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 27.9bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:YTCYYAGTGTYCW
--NCCATTGTTC-
 A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--YTCYYAGTGTYCW--
TGTTCCCATTGTGTACT
 A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:YTCYYAGTGTYCW----
CGAACAGTGCTCACTAT
 A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YTCYYAGTGTYCW---
NNTTTATTGTTCTNNN
 A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YTCYYAGTGTYCW
ATTTCCCAGVAKSCY
 A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---YTCYYAGTGTYCW
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YTCYYAGTGTYCW----
CNNNTATTGTTCNNNNN
 A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YTCYYAGTGTYCW--
ANNTCCATTGTTCNNN
 A C G T A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YTCYYAGTGTYCW
---CCATTGTTC-
 A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YTCYYAGTGTYCW
--NCCATTGTTY-
 A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G C T A G T C C G A T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T