Information for 9-GAACTGCACACAG (Motif 22)

A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G
Reverse Opposite:
A T G C C G A T A C T G A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G C T A C G T A G T C
p-value:1e-8
log p-value:-2.004e+01
Information Content per bp:1.863
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.4 +/- 21.9bp
Average Position of motif in Background39.0 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GAACTGCACACAG----
-AGCGGCACACACGCAA
 A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAACTGCACACAG---
NNTTTGCACACGGCCC
 A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAACTGCACACAG
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAACTGCACACAG----
-CGAAGCACACAAAATA
 A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAACTGCACACAG--
CAGATGTGCACATACGT
 A C G T A C G T A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAACTGCACACAG--
TACATGTGCACATAAAA
 A C G T A C G T A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-12
Orientation:reverse strand
Alignment:------------GAACTGCACACAG
TGGCCANNNNNGGAACTGCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAACTGCACACAG-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAACTGCACACAG-
---CTTCACACCTA
 A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAACTGCACACAG
TCCAATCCACA---
 A C G T A C T G G T C A T C G A A G T C A C G T C T A G A G T C C G T A A G T C C G T A A G T C C G T A A T C G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T