Information for 1-GCCAACAGGGAAAACA (Motif 2)

C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T G C A T A G C T A G C T A G T C A G T C A G T C C G A T A C T G A G C T A C G T A C T G A C T G A G T C
p-value:1e-14
log p-value:-3.292e+01
Information Content per bp:1.843
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.4 +/- 26.7bp
Average Position of motif in Background66.8 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCAACAGGGAAAACA
TGCCCNNAGGGCA----
 A C G T C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCAACAGGGAAAACA
TGCCCTNAGGGCA----
 A C G T C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCAACAGGGAAAACA
TGCCCTNAGGGCA----
 A C G T C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCAACAGGGAAAACA--
-NNNVCTGWGYAAACASN
 C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A A C G T A C G T
A C G T A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCCAACAGGGAAAACA
CACAGCAGGGGG----
 C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCCAACAGGGAAAACA
---AACAAGGAAGTAA
 C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCCAACAGGGAAAACA----
-----CAAAGTAAACANNNN
 C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCCAACAGGGAAAACA
----NCTAAGTAAACA
 C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GCCAACAGGGAAAACA-
---------GTAAACAG
 C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCCAACAGGGAAAACA---
----CAAAAGTAAACAAAG
 C T A G A G T C A G T C G T C A C T G A A G T C C G T A C T A G A C T G A C T G C T G A C T G A C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G