Information for 11-CCCGAAGACCTGCTGC (Motif 17)

A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C C G T A A C T G A G T C C G T A A C T G A T C G G C A T A G T C A C G T A C G T A T G C A C T G A C T G A C T G
p-value:1e-9
log p-value:-2.221e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets24.6 +/- 16.3bp
Average Position of motif in Background46.7 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CCCGAAGACCTGCTGC-
-------AGCAGCTGCT
 A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCCGAAGACCTGCTGC----
-----TNTCCTGCTGTGNNG
 A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCCGAAGACCTGCTGC
------CAGCAGCTGN
 A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CCCGAAGACCTGCTGC
-------ANCAGCTG-
 A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CCCGAAGACCTGCTGC----
-----TCNCCTGCTGNGNNN
 A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCCGAAGACCTGCTGC----
-----NNTCCTGCTGTGNNN
 A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCCGAAGACCTGCTGC-
-----NNAGCAGCTGCT
 A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCCGAAGACCTGCTGC--
---ANCCACCTGTTGCNC
 A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CCCGAAGACCTGCTGC--
--------CCTGCTGAGH
 A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCCGAAGACCTGCTGC--
-----CCACCTGTTGCAT
 A G T C A G T C A G T C A T C G G T C A C G T A A C T G C G T A A T G C A G T C C G A T A C T G A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T