Information for 9-TTGTCCTCTA (Motif 9)

A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A
Reverse Opposite:
G C A T C G T A A C T G G T C A A C T G C T A G G T C A T A G C C G T A T C G A
p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.857
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif79.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets53.2 +/- 21.7bp
Average Position of motif in Background44.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTGTCCTCTA
-TGACCTYA-
 A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCCTCTA---
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTGTCCTCTA
-TGACCYCT-
 A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGTCCTCTA
CNNTTGACCTTTG
 A C G T A C G T A C G T A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTCCTCTA
WCATTTTGKCCTCYT
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTGTCCTCTA---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCTCTA
CCATTGTTTT---
 A C G T A C G T A C G T A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCCTCTA------
NTCNTCCCCTATNNGNN
 A C G T A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGTCCTCTA
GTGACCTT--
 A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCCTCTA---
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A G C T A C G T A T C G A C G T A G T C A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G