Information for 23-CCGCGTGATT (Motif 39)

A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C C G T A A G T C A T C G A G T C A C T G A C T G
p-value:1e-2
log p-value:-6.743e+00
Information Content per bp:1.957
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 29.7bp
Average Position of motif in Background59.1 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CCGCGTGATT
NCACGTGACN
 A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCGCGTGATT--
--CNGTGATTTN
 A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCGCGTGATT
-TGCGTG---
 A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGTGATT
ACCACGTGCTC
 A C G T A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCGCGTGATT
KCCACGTGAC-
 A C G T A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGTGATT
ACCACGTGAC-
 A C G T A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCGCGTGATT
NCCACGTG---
 A C G T A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CCGCGTGATT--
----TTGATTGN
 A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCGCGTGATT
NCACGTGACN
 A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

MLX/MA0663.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCGCGTGATT
ATCACGTGAT-
 A C G T A G T C A G T C A C T G A T G C A C T G A C G T A C T G C G T A A C G T A C G T
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T