Information for 15-AATTCAAGTG (Motif 35)

C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A C G T A C T G C G T A C G T A A C G T A C G T
p-value:1e-6
log p-value:-1.412e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 17.0bp
Average Position of motif in Background49.2 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0114.1_Nkx2-5/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-AATTCAAGTG-----
AAATTCAAGTGGNTTN
 A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:AATTCAAGTG-
--NTCAAGTGG
 C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AATTCAAGTG-----
AANTTCAAGTGGCTTN
 A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:AATTCAAGTG--
--NTCAAGTGGN
 C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AATTCAAGTG-----
AATTTCAAGTGGCTTN
 A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--AATTCAAGTG-----
NANTTTCAAGTGGTTAN
 A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AATTCAAGTG-----
AATNTTAAGTGGNTNN
 A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AATTCAAGTG--
--BTBRAGTGSN
 C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATTCAAGTG--
--CTYRAGTGSY
 C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AATTCAAGTG---
---TTRAGTGSYK
 C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T