Information for 22-TAATTACCACCCCTCC (Motif 34)

A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A C T G A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T C G T A
p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets13.3 +/- 3.4bp
Average Position of motif in Background34.8 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0031.1_Hoxa3_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAATTACCACCCCTCC
GTTAATTANCTCNN----
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A A C G T A C G T A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TAATTACCACCCCTCC
TCGCGATAATTACCGAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C A C G T A C G T A C G T A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TAATTACCACCCCTCC
GCGCTATAATTACCGAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C A C G T A C G T A C G T A C G T A C G T

PH0050.1_Hoxa3/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAATTACCACCCCTCC
ACTAATTANCNCNA----
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
T C G A A G T C G A C T G T C A C G T A A C G T A C G T C T G A T A G C A G T C C A G T A G T C T C G A G T C A A C G T A C G T A C G T A C G T

PH0020.1_Dlx1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAATTACCACCCCTCC
ATTAATTANCTCAN----
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G A C G T A C G T A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAATTACCACCCCTCC
NTTAATTACN--------
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TAATTACCACCCCTCC
ACNNTAATTACNNCAN----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A A C G T A C G T A C G T A C G T

PH0055.1_Hoxa7_2/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TAATTACCACCCCTCC
TNCCATTAATTACTNC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0024.1_Dlx5/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TAATTACCACCCCTCC
NANNGNTAATTACCNN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAATTACCACCCCTCC
GNTAATTAGN--------
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C A G T C A G T C A C G T A G T C A G T C
A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T