Information for 14-GAGTTTTACA (Motif 31)

A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A C G T A C G T A C G T A A G T C A C G T A G T C
p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.7 +/- 21.6bp
Average Position of motif in Background48.6 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GAGTTTTACA
---TTTTCCA
 A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAGTTTTACA--
--ATTTTCCATT
 A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGTTTTACA---
-DGWTTTATGRCN
 A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGTTTTACA---
--NTTTTACGACC
 A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGTTTTACA
CGGTTTCAAA
 A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGTTTTACA---
--NTTTTACGAGN
 A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGTTTTACA---
--NTTTTACGACT
 A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

Hoxa11/MA0911.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGTTTTACA---
-ANTTTTACGACC
 A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTTTACA-----
NNANTTTTATTGGNNN
 A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGTTTTACA--
--NTTTTACGAC
 A C T G C G T A A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C