Information for 12-CCAAGTCCTT (Motif 29)

A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A C T A G A C T G C G T A A G T C A C G T A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.483e+01
Information Content per bp:1.941
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.7 +/- 29.3bp
Average Position of motif in Background45.1 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGTCCTT----
CNTTAAGTACTTAANG
 A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCAAGTCCTT-----
TACTAAGTACTTAAATG
 A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGTCCTT-----
TTCNAAGTACTTNNNNN
 A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCAAGTCCTT-
ACCACATCCTGT
 A C G T A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T A C G T
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

Myc/MA0147.2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCAAGTCCTT
CCATGTGCTT
 A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

PH0116.1_Nkx2-9/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCAAGTCCTT----
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAAGTCCTT
TTAAGTGCTT
 A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAAGTCCTT
ACCACGTGCTC
 A C G T A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCAAGTCCTT--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGTCCTT
TGCCAA------
 A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T G T A C A G T C A C G T A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T