Information for 17-GAATAGTGTGACR (Motif 28)

A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G
Reverse Opposite:
A G T C C T A G C G A T G T A C C G T A A G T C G T C A A T G C G A C T T G C A C G A T C A G T G T A C
p-value:1e-6
log p-value:-1.526e+01
Information Content per bp:1.739
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 26.2bp
Average Position of motif in Background40.4 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAATAGTGTGACR
---AGGTGTGAAM
 A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G
A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAATAGTGTGACR
---AGGTGTGA--
 A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G
A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAATAGTGTGACR
--AAGGTGTKAA-
 A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAATAGTGTGACR---
GAAAAGGTGTGAAAATT
 A C G T A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAATAGTGTGACR--
--AAGGTGTGAAAAT
 A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G A C G T A C G T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAATAGTGTGACR
---AGGTGTGA--
 A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G
A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAATAGTGTGACR
--AAGGTGTGAAA
 A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAATAGTGTGACR
--ATGGGGTGAT-
 A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G
A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAATAGTGTGACR
--AAGGTGTGAA-
 A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G
A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAATAGTGTGACR
-NNNANTGA----
 A C T G G C T A C G T A A C G T C G T A A T C G A C G T A C T G C G A T A C T G C G T A A G T C C T A G
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T