Information for 10-AGGCACACACAGY (Motif 14)

T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T
Reverse Opposite:
C T G A A G T C A C G T A T C G A C G T C T A G A G C T A C T G A C G T A C T G A T G C G T A C A C G T
p-value:1e-10
log p-value:-2.417e+01
Information Content per bp:1.790
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif35.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets67.0 +/- 18.3bp
Average Position of motif in Background48.6 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGGCACACACAGY-
AGCGGCACACACGCAA
 A C G T A C G T T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGGCACACACAGY-
CGAAGCACACAAAATA
 A C G T A C G T T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGCACACACAGY
CCAGGAACAG-----
 A C G T A C G T T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGCACACACAGY--
VAGRACAKNCTGTBC
 T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGGCACACACAGY
-GCCACACCCA--
 T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T
A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGCACACACAGY
GGCCACACCCAN-
 T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGCACACACAGY
---NANANAC---
 T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T
A C G T A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:AGGCACACACAGY
-------CACAGN
 T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGCACACACAGY---
NAGAACAGNCTGTNCT
 T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T A C G T A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGGCACACACAGY
TACATGTGCACATAAAA-
 A C G T A C G T A C G T A C G T A C G T T G C A C A T G A T C G G T A C C G T A A G T C C T G A A G T C C G T A A T G C C G T A C T A G G A C T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T