Information for 16-CCRTTKCYWGGAGWSA (Motif 30)

A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A
Reverse Opposite:
C A G T A T C G C G A T A G T C A C G T A G T C A G T C G C T A C T A G A C T G G T A C C G T A C G T A A G T C C T A G A T C G
p-value:1e-6
log p-value:-1.405e+01
Information Content per bp:1.841
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 21.6bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCRTTKCYWGGAGWSA
-KGTTGCTAGGMAACA
 A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A
A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCRTTKCYWGGAGWSA--
---TTTCCTGGAAAGNNN
 A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCRTTKCYWGGAGWSA
NCCGTTGCTANGNGN--
 A C G T A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCRTTKCYWGGAGWSA--
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCRTTKCYWGGAGWSA
---TTTCCAGGAAA--
 A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCRTTKCYWGGAGWSA
CTGTTGCTAGGS----
 A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCRTTKCYWGGAGWSA
--NTTTCCNGGAAA--
 A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A
A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCRTTKCYWGGAGWSA
-NATTTCCNGGAAAT-
 A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A
A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCRTTKCYWGGAGWSA
---CTTCTGGGAAA--
 A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A
A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCRTTKCYWGGAGWSA
NNCGTTGCTATGGNN--
 A C G T A T G C A G T C C T A G A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G C G T A A C T G C G T A A T G C G T C A
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T A C G T