Information for 8-CCAGCCCTCCAKGGAM (Motif 10)

A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C
Reverse Opposite:
A C T G A C G T A T G C A G T C G T C A A C G T A C T G T A C G C G T A C T A G A T C G C A T G A G T C C G A T C T A G A C T G
p-value:1e-13
log p-value:-3.110e+01
Information Content per bp:1.810
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.1 +/- 17.3bp
Average Position of motif in Background60.4 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CCAGCCCTCCAKGGAM-
------CTTCTGGGAAA
 A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CCAGCCCTCCAKGGAM
------CTTCCNGGAA
 A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAGCCCTCCAKGGAM
SCAGYCADGCATGAC-
 A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCAGCCCTCCAKGGAM-
-----NTTTCCNGGAAA
 A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

Stat4/MA0518.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CCAGCCCTCCAKGGAM----
------TTTCCAGGAAATGG
 A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CCAGCCCTCCAKGGAM--
-------TTCTTGGAAAN
 A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CCAGCCCTCCAKGGAM---
-----NCTTCCNGGAAGNN
 A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCAGCCCTCCAKGGAM-
------TTTCCAGGAAA
 A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCAGCCCTCCAKGGAM
CNAGGCCT--------
 A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCAGCCCTCCAKGGAM-----
------TTTCCTGGAAAGNNN
 A G T C G A T C C G T A A C T G G A T C A T G C A G T C A C G T A G T C A G T C G T C A A C G T A C T G A T C G C G T A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A