Information for 1-BTCATGMATATKCATG (Motif 1)

A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G
Reverse Opposite:
G A T C C G T A A C G T T C A G G T C A C T G A A G C T C T G A A G C T C A G T A G T C G T C A C G A T C T A G C T G A T C G A
p-value:1e-292
log p-value:-6.738e+02
Information Content per bp:1.693
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif12.31%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.1 +/- 15.4bp
Average Position of motif in Background16.8 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:BTCATGMATATKCATG
CTCATGAATATTCAT-
 A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.89
Offset:2
Orientation:forward strand
Alignment:BTCATGMATATKCATG-
--YATGCATATRCATRT
 A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G A C G T
A C G T A C G T G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.85
Offset:5
Orientation:reverse strand
Alignment:BTCATGMATATKCATG
-----GHATATKCAT-
 A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.84
Offset:5
Orientation:reverse strand
Alignment:BTCATGMATATKCATG
-----GAATATTCAT-
 A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G
A C G T A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.67
Offset:4
Orientation:forward strand
Alignment:BTCATGMATATKCATG-
----TTCATTTGCATAT
 A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G A C G T
A C G T A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.66
Offset:7
Orientation:forward strand
Alignment:BTCATGMATATKCATG-----
-------ACATTCATGACACG
 A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:BTCATGMATATKCATG----
---TNNATTATGCATANNTT
 A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:BTCATGMATATKCATG----
---GACCACATTCATACAAT
 A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:BTCATGMATATKCATG---
---TNTAATTTGCATANNN
 A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:BTCATGMATATKCATG---
---TNTAATTTGCATACNA
 A G C T G A C T G A T C G C T A A C G T T C A G G T C A C T G A G A C T C T G A G A C T C A G T A G T C G T C A C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A