Information for 12-GTTAATTYAG (Motif 34)

C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G
Reverse Opposite:
G T A C A G C T C T A G G T C A C G T A A G C T A C G T C G T A C T G A A G T C
p-value:1e-5
log p-value:-1.220e+01
Information Content per bp:1.805
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif198.5
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets43.4 +/- 28.3bp
Average Position of motif in Background51.5 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0153.1_Prop1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GTTAATTYAG----
CGAATTAATTAAGAAAC
 A C G T A C G T A C G T C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G A C G T A C G T A C G T A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GTTAATTYAG
ATATTAATTAA-
 A C G T A C G T C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T

NOTO/MA0710.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTTAATTYAG
NNTAATTAGN
 C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

PH0011.1_Alx1_2/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GTTAATTYAG----
CGCATTAATTAATTGGC
 A C G T A C G T A C G T C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G A C G T A C G T A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

PH0128.1_Otp/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTTAATTYAG----
CNNATTAATTAATTNNN
 A C G T A C G T A C G T C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G A C G T A C G T A C G T A C G T
G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G

UNCX/MA0721.1/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTTAATTYAG
-NTAATTAN-
 C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G
A C G T A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G A C G T

SHOX/MA0630.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GTTAATTYAG
-TTAATTGG-
 C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G
A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G A C G T

PH0136.1_Phox2b/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTTAATTYAG----
CNNNTTAATTAATTNNN
 A C G T A C G T A C G T C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G A C G T A C G T A C G T A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

mix-a/MA0621.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTTAATTYAG
AATTAATTAGT
 A C G T C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0173.1_Uncx/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTTAATTYAG----
CNCNTTAATTAATTANN
 A C G T A C G T A C G T C T A G A G C T A C G T C G T A T C G A A C G T A C G T A G T C C T G A A C T G A C G T A C G T A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G