Information for 20-ACAATTCCCATCA (Motif 31)

C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A C T G A T C G A T C G C G T A C G T A A G C T A C G T A C T G A C G T
p-value:1e-7
log p-value:-1.703e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 21.4bp
Average Position of motif in Background69.5 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACAATTCCCATCA
ACTACAATTCCC----
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ACAATTCCCATCA---
AACTACAATTCCCAGAATGC
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ACAATTCCCATCA---
RACTACAACTCCCAGVAKGC
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ACAATTCCCATCA
NNCNNAACAATTNT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ACAATTCCCATCA----
--ATTTCCCAGVAKSCY
 C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0115.1_Ehf_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACAATTCCCATCA-
TAGTATTTCCGATCTT
 A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ACAATTCCCATCA
TNCNNAACAATTTTTNC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATTCCCATCA
NNNNNGAACAATTGANN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAATTCCCATCA
NAACAAT--------
 A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACAATTCCCATCA
AACAAT--------
 A C G T C G T A A G T C C G T A C T G A A C G T A C G T A T G C A T G C A G T C C G T A C G A T A G T C C G T A
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T