Information for 12-TGAASAAGGCAGC (Motif 18)

A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C A C G T A T C G A G T C A T G C A C G T A C G T T A C G C G A T A C G T A G T C G T C A
p-value:1e-9
log p-value:-2.095e+01
Information Content per bp:1.829
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.9 +/- 19.6bp
Average Position of motif in Background57.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGAASAAGGCAGC
-CAAGATGGCGGC
 A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAASAAGGCAGC
GGAACAAAGR---
 A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGAASAAGGCAGC-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGAASAAGGCAGC
---ANCAGGAAGT
 A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C
A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGAASAAGGCAGC
-CAAGATGGCGGC
 A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGAASAAGGCAGC
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGAASAAGGCAGC-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGAASAAGGCAGC
-GAACAATGGN--
 A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGAASAAGGCAGC
TGAATTATGCAT-
 A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGAASAAGGCAGC---
-----AAGGCAAGTGT
 A C G T A C T G C G T A C G T A A T G C G T C A C G T A A T C G A C T G A T G C C G T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T