Information for 9-AGATAATCACCTC (Motif 11)

C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A T C A G A C T G A G C T A C T G C G T A A C G T A G C T C G T A A C G T A G T C A C G T
p-value:1e-10
log p-value:-2.493e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.7 +/- 23.9bp
Average Position of motif in Background42.3 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA2/MA0036.2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGATAATCACCTC
NCAGATAAGAANNN-
 A C G T A C G T C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGATAATCACCTC
--ATTAACACCT-
 C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C
A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGATAATCACCTC
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGATAATCACCTC
AGATAAGA-----
 C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGATAATCACCTC--
NTAGTTAATCCCCTTAN
 A C G T A C G T C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

Gata1/MA0035.3/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGATAATCACCTC
ANAGATAAGAA----
 A C G T A C G T C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGATAATCACCTC
AGATAASR-----
 C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGATAATCACCTC
NAGATAAGNN----
 A C G T C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGATAATCACCTC
TAATGATGATCACTA-
 A C G T A C G T A C G T C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A A C G T

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGATAATCACCTC--
ATAGTTAATCCCCCNNA
 A C G T A C G T C G T A C T A G C G T A C G A T C T G A C G T A C G A T A G T C C T G A A G T C A G T C A C G T A G T C A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A