Information for 5-TKGRAAAAYCMAM (Motif 8)

C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
Reverse Opposite:
C A G T A C G T A C T G A T C G C T A G C G A T A C G T A C G T A G C T A G C T A G T C G T A C C G T A
p-value:1e-13
log p-value:-3.181e+01
Information Content per bp:1.739
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif94.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets45.7 +/- 24.1bp
Average Position of motif in Background45.2 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TKGRAAAAYCMAM
--GGAAANCCCC-
 C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TKGRAAAAYCMAM
-GGGAAATCCCCN
 C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TKGRAAAAYCMAM
NATGGAAAAN-----
 A C G T A C G T C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TKGRAAAAYCMAM
AATGGAAAAT-----
 A C G T A C G T C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TKGRAAAAYCMAM
--GGAAATTCCC-
 C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TKGRAAAAYCMAM
-TGGAAAA-----
 C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TKGRAAAAYCMAM
--GGAAATCCCC-
 C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TKGRAAAAYCMAM
CSTGGGAAAD-----
 A C G T A C G T C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TKGRAAAAYCMAM
AATGGAAAAT-----
 A C G T A C G T C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TKGRAAAAYCMAM
--GGAAATTCCC-
 C G A T A C T G A C T G T C A G C T G A C G T A G T C A C G T A A G T C A T G C G T A C C G T A G T C A
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T