Information for 8-GGCATGCTGG (Motif 7)

C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C G C T A A C T G A G T C C T G A G C A T A C T G G T A C G A T C
p-value:1e-18
log p-value:-4.222e+01
Information Content per bp:1.753
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.97%
Number of Background Sequences with motif873.8
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets45.4 +/- 25.9bp
Average Position of motif in Background51.8 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GGCATGCTGG--
--CCTGCTGAGH
 C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCTGG----
TCNCCTGCTGNGNNN
 A C G T C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGCATGCTGG-----
RGSMTBCTGGGAAAT
 C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCTGG----
NNTCCTGCTGTGNNN
 A C G T C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GGCATGCTGG---
--CATGCGGGTAC
 C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCTGG----
TNTCCTGCTGTGNNG
 A C G T C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGCATGCTGG--
--TATGCGGGTA
 C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCTGG-----
NNNNATGCGGGTNNNN
 A C G T C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCATGCTGG--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCTGG-
CCCCCTGCTGTG
 A C G T C T A G C A T G A G T C C G T A G A C T T C A G G T A C C G A T A C T G A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G