Information for 2-ACTTGTTMTG (Motif 2)

C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G
Reverse Opposite:
T A G C G T C A C A G T C G T A C G T A G T A C G T C A C G T A A C T G A C G T
p-value:1e-33
log p-value:-7.808e+01
Information Content per bp:1.768
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif9.82%
Number of Background Sequences with motif681.8
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets55.8 +/- 21.7bp
Average Position of motif in Background50.2 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----ACTTGTTMTG--
AATATACATGTAAAACA
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ACTTGTTMTG--
AATATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ACTTGTTMTG--
AATATACATGTAATATA
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ACTTGTTMTG--
AAAATACATGTAATACT
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

GRHL1/MA0647.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACTTGTTMTG
NAAACCGGTTTT-
 A C G T A C G T A C G T C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGTTMTG
NCACCTGTN---
 A C G T A C G T C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGTTMTG-----
NNCTTTGTTTTGNTNNN
 A C G T A C G T C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACTTGTTMTG
AACACGTGTT---
 A C G T A C G T A C G T C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----ACTTGTTMTG-
CNGACACCTGTTCNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ACTTGTTMTG--
TAAATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C G C A T A C G T A C T G A C G T C G A T G T C A C A G T A T C G A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T