Information for 7-SWAGTSTGAGTAM (Motif 13)

A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C G T A G T C C G T A A T C G C G T A A G T C A C G T G C A T A T G C
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 15.0bp
Average Position of motif in Background47.0 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX1/MA0805.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SWAGTSTGAGTAM
-AGGTGTGA----
 A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SWAGTSTGAGTAM
-AGGTGTGA----
 A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:SWAGTSTGAGTAM
------TGAGTCA
 A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

TBX15/MA0803.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SWAGTSTGAGTAM
-AGGTGTGA----
 A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SWAGTSTGAGTAM
GTAATCDGATTA-
 A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SWAGTSTGAGTAM
-AGGTGTGA----
 A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SWAGTSTGAGTAM
-TWGTCTGV----
 A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:SWAGTSTGAGTAM
AAGGTGTGAAAAT
 A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:SWAGTSTGAGTAM---
----DATGASTCATNN
 A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:SWAGTSTGAGTAM-------
---TTCNAAGTACTTNNNNN
 A T C G C G T A C G T A A C T G A C G T A T G C C G A T A C T G C G T A A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T