Information for 7-GGGCAAGCCA (Motif 7)

C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A
Reverse Opposite:
A C G T C A T G A C T G G A T C A G C T G A C T T C A G A G T C G T A C G A T C
p-value:1e-11
log p-value:-2.719e+01
Information Content per bp:1.678
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif7.47%
Number of Background Sequences with motif1093.6
Percentage of Background Sequences with motif2.40%
Average Position of motif in Targets52.8 +/- 29.2bp
Average Position of motif in Background48.6 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAAGCCA
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAGCCA
TNNGGGCAG----
 A C G T A C G T A C G T C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAGCCA----
TTNGGGTACGCCNNANN
 A C G T A C G T A C G T C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAGCCA
NGTGGGCAT----
 A C G T A C G T A C G T C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GGGCAAGCCA-
-----TGCCAA
 C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGGCAAGCCA--
---CGTGCCAAG
 C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAGCCA-
CNGTCACGCCAC
 A C G T C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAGCCA
AAGGCAAGTGT
 A C G T C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGCAAGCCA-----
AGGGAAGTCATTTCT
 C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A A C G T A C G T A C G T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAAGCCA-
AGGTGNCAGACAG
 A C G T A C G T C T A G C A T G T C A G A G T C C T G A T C G A C T A G T G A C G T A C T G C A A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G