Information for 3-GTGGCCAGGCGTGCAG (Motif 4)

A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
Reverse Opposite:
G T A C G C A T A C T G A T G C G C T A A T G C C T A G A G T C A G T C A G C T A C T G A C T G T A G C A G T C C G T A G T A C
p-value:1e-17
log p-value:-4.064e+01
Information Content per bp:1.762
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 21.4bp
Average Position of motif in Background44.7 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTGGCCAGGCGTGCAG
ATGCCCGGGCATGT--
 A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGGCCAGGCGTGCAG
-TGCCCAGNHW-----
 A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTGGCCAGGCGTGCAG
GGGGCCGAGGCCTG---
 A C G T A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCCAGGCGTGCAG
CTGTTGCTAGGS------
 A C G T A C G T A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GTGGCCAGGCGTGCAG
-----CAGGTGAGG--
 A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTGGCCAGGCGTGCAG
----CTAGGCCT----
 A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTGGCCAGGCGTGCAG
----CNAGGCCT----
 A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGGCCAGGCGTGCAG
ATGCCCACC-------
 A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGGCCAGGCGTGCAG
TTGCCAAG--------
 A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTGGCCAGGCGTGCAG
----VCAGGTRDRY--
 A C T G A C G T A C T G A T C G A G T C T A G C C T G A A C T G A C T G A G T C T A C G C G A T A T C G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T