Information for 22-AGGATACAAA (Motif 32)

C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A
Reverse Opposite:
C G A T C G A T C A G T C A T G G A C T G C T A C G A T A T G C G A T C G C A T
p-value:1e0
log p-value:-2.052e+00
Information Content per bp:1.631
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.0 +/- 0.0bp
Average Position of motif in Background53.8 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGGATACAAA
NTTGATACATT
 A C G T C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGGATACAAA--
ATTTGCATACAATGG
 A C G T A C G T A C G T C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGATACAAA
CGGTTTCAAA
 C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGGATACAAA----
-ATATGCAAATNNN
 C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A A C G T A C G T A C G T A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGATACAAA----
AAAGTAAACAAAAATT
 A C G T A C G T C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGATACAAA-----
TTGTATGCAAATTAGA
 A C G T C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGATACAAA-----
TTGTATGCAAATTAGA
 A C G T C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGATACAAA-----
TTGTATGCAAATTAGA
 A C G T C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGATACAAA--
AGGAAACAGCTG
 C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A A C G T A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGATACAAA-
-TTATGCAAAT
 C G T A C T A G T A C G G C T A C G A T C T G A G T A C G T C A G C T A G C T A A C G T
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T