Information for 16-ACTTTATTAT (Motif 28)

G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T
Reverse Opposite:
G T C A A G C T C G T A C G T A A C G T C G T A C T G A C G T A A C T G C G A T
p-value:1e-4
log p-value:-1.080e+01
Information Content per bp:1.838
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif171.5
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets51.5 +/- 21.5bp
Average Position of motif in Background52.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ACTTTATTAT
TTTTTATTGG
 G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

CDX1/MA0878.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ACTTTATTAT
-TTTTATTGC
 G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T
A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----ACTTTATTAT---
NTNAATTTTATTGNATT
 A C G T A C G T A C G T A C G T G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ACTTTATTAT-
NTTTTATTACN
 G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACTTTATTAT
NTTTTATGAC
 G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACTTTATTAT
NTTTTATTGG
 G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTATTAT---
NNAATTTTATTGGNTN
 A C G T A C G T A C G T G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTATTAT---
NNANTTTTATTGGNNN
 A C G T A C G T A C G T G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACTTTATTAT-
-TTTTATTRGN
 G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACTTTATTAT--
-TTTTATGGCTN
 G C T A A G T C A C G T A G C T A C G T C G T A C G A T A C G T C T G A A C G T A C G T A C G T
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T