Information for 15-AATTTAAATG (Motif 27)

C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
p-value:1e-5
log p-value:-1.164e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.8 +/- 32.8bp
Average Position of motif in Background44.9 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AATTTAAATG
NATTCAAAT-
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AATTTAAATG-----
AAATTCAAGTGGNTTN
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AATTTAAATG--
--TTTAATTGCN
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AATTTAAATG-
---TTAAGTGC
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AATTTAAATG--
--GCTAAACGGT
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AATTTAAATG--
--GCTAATTGCT
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AATTTAAATG----
NTNAATTTTATTGNATT
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AATTTAAATG--
WATGCAAATGAG
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AATTTAAATG-
-TTTTTATTGC
 C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T
A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

PROP1/MA0715.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AATTTAAATG
TAATTTAATTA
 A C G T C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A